rhizoSMASH
dev
Gene cluster detection for rhizosphere competence in bacteria
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antiSMASH
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Demonstrations
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use sample input
demo output
Pseudomonas protegens CHA0
Pseudomonas simiae WCS417
Bacillus velezensis FZB42
Burkholderia cenocepacia CR318
Paraburkholderia phytofirmans PsJN
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example input
GenBank input
FASTA input
FASTA input with GFF annotations
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Job Parameters
Upload genome (required)
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Extra GFF annotation (optional)
Choose File
Run
Prodigal
for gene-finding
Detection strictness
strict
relaxed
Additional analysis modules
KnownClusterBlast
Pfam Scan in Clusters
TIGRFAMs Scan in Clusters
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